BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014B08SP1|AL426647
(728 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig202 1443 0.0
>3x_Contig202
Length = 1756
Score = 1443 bits (728), Expect = 0.0
Identities = 728/728 (100%)
Strand = Plus / Plus
Query: 1 gatcactcttcttgtaaccattcaatagtaataacttgatctggatgaggattggatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 gatcactcttcttgtaaccattcaatagtaataacttgatctggatgaggattggatttg 762
Query: 61 cagttggtcgtaaaatcttagatagtttaccaaccttcaacgacaactggaaattcccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 cagttggtcgtaaaatcttagatagtttaccaaccttcaacgacaactggaaattcccct 822
Query: 121 gttgaatattaaactttttctttatttgtggtataagttcggccacagatgtatttggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 gttgaatattaaactttttctttatttgtggtataagttcggccacagatgtatttggac 882
Query: 181 gacatgaaagggttgtgaaagtatcatcgacattgaagattctaatagcatattttttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 gacatgaaagggttgtgaaagtatcatcgacattgaagattctaatagcatattttttgg 942
Query: 241 tttggtcaatatccgaaagatcactataatacttctcaagcatatgttcttcgtattcgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 tttggtcaatatccgaaagatcactataatacttctcaagcatatgttcttcgtattcgg 1002
Query: 301 tttctccatctagttctgtatattgttcgatatttttttgtgatagaggcgaacctggtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 tttctccatctagttctgtatattgttcgatatttttttgtgatagaggcgaacctggtc 1062
Query: 361 gagattgcgtcttagcagaagttatatcgtctaggctttctgattgggtttcaatggaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 gagattgcgtcttagcagaagttatatcgtctaggctttctgattgggtttcaatggaaa 1122
Query: 421 tgtctgagtcttcgtcgccgttgggagaaattgtgaaacaaagatcgcattcggagcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1123 tgtctgagtcttcgtcgccgttgggagaaattgtgaaacaaagatcgcattcggagcttt 1182
Query: 481 tcgtttctgataaatgcagtcccgattcgtcattcgatcctctgttaggaggagaagtgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1183 tcgtttctgataaatgcagtcccgattcgtcattcgatcctctgttaggaggagaagtgc 1242
Query: 541 gcggtgacaatgcgtcttcttcaaagtcatgatggtgtacatgaggaattactggctccg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1243 gcggtgacaatgcgtcttcttcaaagtcatgatggtgtacatgaggaattactggctccg 1302
Query: 601 aagtatctttcgcaatgacattttttggaacagaccccttggtatgttttccttgtgatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1303 aagtatctttcgcaatgacattttttggaacagaccccttggtatgttttccttgtgatt 1362
Query: 661 tgctgtaccttttgcggtttttccctctatgtcgattggcctttgacatcttatgtcttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1363 tgctgtaccttttgcggtttttccctctatgtcgattggcctttgacatcttatgtcttt 1422
Query: 721 ctttaatt 728
||||||||
Sbjct: 1423 ctttaatt 1430
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5779
Number of Sequences: 1807
Number of extensions: 5779
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 728
length of database: 10,358,551
effective HSP length: 16
effective length of query: 712
effective length of database: 10,329,639
effective search space: 7354702968
effective search space used: 7354702968
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)